Insertion junction: LMJ.RY0402.046001_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.046001
Chromosome:chromosome 13
Location:4036306
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g591100 MSCL3,MSC5 (1 of 1) IPR000104//IPR002048//IPR006685//IPR010920 - Antifreeze protein, type I // EF-hand domain // Mechanosensitive ion channel MscS // LSM domain; Predicted protein with mechanosensitive ion channel domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATGCAAAAGAGCGAGGAGGAGAGCGAG
Internal bar code:ATTTCATTGAACAGTGTCGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:224
LEAP-Seq percent confirming:99.3292
LEAP-Seq n confirming:13030
LEAP-Seq n nonconfirming:88
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTAGATACCAGCCCCAA
Suggested primer 2:CTAAACCCAACCAAGCCAAA