Insertion junction: LMJ.RY0402.080951_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.080951
Chromosome:chromosome 13
Location:4027666
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre13.g591100 MSCL3,MSC5 (1 of 1) IPR000104//IPR002048//IPR006685//IPR010920 - Antifreeze protein, type I // EF-hand domain // Mechanosensitive ion channel MscS // LSM domain; Predicted protein with mechanosensitive ion channel domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCATGTTTATTCATGTGTTTGCGGCTCT
Internal bar code:CTTGTCTCATTGCAGGATTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:175
LEAP-Seq percent confirming:97.9563
LEAP-Seq n confirming:1390
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAACTGGTAGGGATGCGA
Suggested primer 2:AGTTTGGCTTGGTTTGGTTG