Insertion junction: CLIP2.006369_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006369
Chromosome:chromosome 13
Location:4126254
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591100 MSCL3,MSC5 (1 of 1) IPR000104//IPR002048//IPR006685//IPR010920 - Antifreeze protein, type I // EF-hand domain // Mechanosensitive ion channel MscS // LSM domain; Predicted protein with mechanosensitive ion channel domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATGAATGGCTACCCATACCCCCCACCCCCTGGTAGCACAGCTCGCAT
Internal bar code:ACTTCCAGTAGCTCTTGCTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:439
LEAP-Seq percent confirming:12.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGAAATGGTGCAAACGC
Suggested primer 2:ATTAGGCCGATGCGTGAGAG