Insertion junction: CLIP2.002527_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002527
Chromosome:chromosome 6
Location:8041685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305000 Conserved WD40-repeat Protein; (1 of 1) PTHR22850//PTHR22850:SF87 - WD40 REPEAT FAMILY // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAGGCTTGGATTTAGCTGGTCGCTCGAGCTAGAAACATAAAAGGGGAC
Internal bar code:TTGGTGTGCAGTATCTTGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2521
LEAP-Seq percent confirming:81.5789
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGTCGTCTGTCGTCAGG
Suggested primer 2:GCACCATGTTCACCAACACC