Gene: Cre06.g305000
Overview
| Common name: | |
| Defline: | Conserved WD40-repeat Protein; (1 of 1) PTHR22850//PTHR22850:SF87 - WD40 REPEAT FAMILY // SUBFAMILY NOT NAMED |
| Description: | |
| Synonyms: | Cre06.g305000.t1.1,g7060.t1 |
| Chromosome: | chromosome 6 |
Protein Localization
A plasmid for expressing Cre06.g305000 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre06.g305000-Venus-3xFLAG
Imaged strain: CSI_LW08G12
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
cytosol/cytosol (strong signal)
nucleus/nucleoplasm
nucleus/nucleolus
(with similar signal in chloroplast, cytosol, and nucleus)
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002527_1 | CLIP2.002527 | intron | 80 | 6.1 |
| CLIP2.003455_1 | CLIP2.003455 | CDS | 80 | 6.1 |
| CLIP2.003455_2 | CLIP2.003455 | CDS | 80 | 6.1 |
| CLIP2.003645_1 | CLIP2.003645 | intron | 80 | 6.1 |
| CLIP2.003645_2 | CLIP2.003645 | intron | 80 | 6.1 |
| CLIP2.003660_1 | CLIP2.003660 | intron | 80 | 6.1 |
| CLIP2.003681_1 | CLIP2.003681 | 3'UTR | 80 | 6.1 |
| CLIP2.003681_2 | CLIP2.003681 | 3'UTR | 80 | 6.1 |
| CLIP2.005279_1 | CLIP2.005279 | CDS/intron | 80 | 6.1 |
| CLIP2.005279_2 | CLIP2.005279 | CDS/intron | 80 | 6.1 |
| CLIP2.005876_1 | CLIP2.005876 | intron | 80 | 6.1 |
| CLIP2.007224_1 | CLIP2.007224 | 3'UTR | 80 | 6.1 |
| CLIP2.007224_2 | CLIP2.007224 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.077628_1 | LMJ.RY0402.077628 | intron | 73 | 5.5 |
| LMJ.RY0402.236151_2 | LMJ.RY0402.236151 | intron | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00400 |
| PANTHER: | PTHR22850 PTHR22850:SF87 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG0279 |
| Gene ontology terms:: | GO:0005515 |
| Best arabidopsis TAIR name: | AT5G16750.1 |
| Best arabidopsis TAIR symbol: | TOZ |
| Best arabidopsis TAIR defline: | Transducin family protein / WD-40 repeat family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.