Insertion junction: CLIP2.003645_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003645
Chromosome:chromosome 6
Location:8041219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305000 Conserved WD40-repeat Protein; (1 of 1) PTHR22850//PTHR22850:SF87 - WD40 REPEAT FAMILY // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGGTTAAAAAGGCACTCAAACGCCAATCGCCAAATGCCGATCGCGCG
Internal bar code:AACAGATCTTATAGAAACATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2844
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGCTTCTTTCGGCTGCT
Suggested primer 2:AGTGACAGGACGTGAGCAAG