Insertion junction: CLIP2.005876_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005876
Chromosome:chromosome 6
Location:8043156
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305000 Conserved WD40-repeat Protein; (1 of 1) PTHR22850//PTHR22850:SF87 - WD40 REPEAT FAMILY // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCGCGCGGCTGGGTTGCGTATGGGCAGCCCCCCCCCTCCGCCCCGGG
Internal bar code:AAACGGCTAGCGATTACAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2483
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTCTGTGTGTGTGCGTCC
Suggested primer 2:AAGAGCCTTCATGACCAGCC