Insertion junction: CLIP2.003645_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003645
Chromosome:chromosome 6
Location:8041229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305000 Conserved WD40-repeat Protein; (1 of 1) PTHR22850//PTHR22850:SF87 - WD40 REPEAT FAMILY // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAACCGGCCGAGATGTTCTATGCCTGAATTATGGCTACATAAGATGCTG
Internal bar code:TGGTACAGGCGTATGGACTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5220
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:121
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:132

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGACAGGACGTGAGCAAG
Suggested primer 2:ATGAGCTTCTTTCGGCTGCT