Insertion junction: CLIP2.003660_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003660
Chromosome:chromosome 6
Location:8042311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305000 Conserved WD40-repeat Protein; (1 of 1) PTHR22850//PTHR22850:SF87 - WD40 REPEAT FAMILY // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCCTCAGCCATCCACCTCCGCCTTCGCCCTCCGCAGAAAGCTCCCGG
Internal bar code:AAAGGGAGTAACATACTGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4994
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:111

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCCGAAAGAAGCTCAT
Suggested primer 2:CCTGTTTGTGCCTTCACTGC