Insertion junction: CLIP2.003681_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003681
Chromosome:chromosome 6
Location:8038977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305000 Conserved WD40-repeat Protein; (1 of 1) PTHR22850//PTHR22850:SF87 - WD40 REPEAT FAMILY // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACTGTGCCGGGGACGCTATGGCATTCGAGCTGTGCTGGGGACGCCGAA
Internal bar code:TGTTGATGTGGATGGTTAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2847
LEAP-Seq percent confirming:42.5
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTTGGTGAACACTGTGC
Suggested primer 2:CTTGCTCACGTCCTGTCACT