Insertion junction: CLIP2.003681_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003681
Chromosome:chromosome 6
Location:8038977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305000 Conserved WD40-repeat Protein; (1 of 1) PTHR22850//PTHR22850:SF87 - WD40 REPEAT FAMILY // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGCCGCACGCTCGCATGTGCCCTTGATGCAGCTGTTGCTTCCGTGGT
Internal bar code:GCCAGGTCATGGCTCTGCAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3526
LEAP-Seq percent confirming:98.913
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCTCACGTCCTGTCACT
Suggested primer 2:GACGTTGGTGAACACTGTGC