Insertion junction: CLIP2.002534_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002534
Chromosome:chromosome 2
Location:7005416
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389615 MAC1 psaC mRNA stabilization factor; (1 of 1) PTHR23083//PTHR23083:SF403 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGAGAGGGCTGGGGCACTGGCGGCGCTAGCGGTACGAAGTCATGCAAG
Internal bar code:AAGAAATTTTTACTCTACCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2437
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAAGTCTCTCCGCTTCTT
Suggested primer 2:TTAGAATCCTCGCTGGCACG