Gene: Cre09.g389615

Overview

Common name:	MAC1
Defline:	psaC mRNA stabilization factor; (1 of 1) PTHR23083//PTHR23083:SF403 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED
Description:	repressed in low iron and differentially phosphorylated in response to iron availability
Synonyms:	Cre02.g124700.t1.2,Cre02.g124700.t1.1,g9646.t1
Chromosome:	chromosome 2 (genome version v6.1), chromosome 9 (genome version v5.5)

Protein Localization

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.001936_1	CLIP2.001936	CDS	80	6.1
CLIP2.001936_2	CLIP2.001936	CDS	80	6.1
CLIP2.002185_1	CLIP2.002185	intron	80	6.1
CLIP2.002185_2	CLIP2.002185	intron	80	6.1
CLIP2.002534_1	CLIP2.002534	intron	80	6.1
CLIP2.003022_1	CLIP2.003022	intron	80	6.1
CLIP2.003022_2	CLIP2.003022	intron	80	6.1
CLIP2.003211_1	CLIP2.003211	5'UTR	80	6.1
CLIP2.003211_2	CLIP2.003211	5'UTR	80	6.1
CLIP2.005599_1	CLIP2.005599	intron	80	6.1
CLIP2.005898_2	CLIP2.005898	intron	80	6.1
LMJ.RY0402.069502_1	LMJ.RY0402.069502	intron	73	5.5
LMJ.RY0402.146621_1	LMJ.RY0402.146621	CDS	73	5.5
LMJ.RY0402.191660_2	LMJ.RY0402.191660	intron	58	5.5
LMJ.RY0402.203136_3	LMJ.RY0402.203136	intron	58	5.5
LMJ.RY0402.235130_3	LMJ.RY0402.235130	3'UTR	58	5.5
LMJ.RY0402.243144_1	LMJ.RY0402.243144	intron	73	5.5

Gene Annotations

PFAM:	PF13371, PF13432
PANTHER:	PTHR23083 PTHR23083:SF403
KEGG_ec:
KEGG_orthology:	K12855
KOG:
Gene ontology terms::	GO:0005515, GO:0005622, GO:0006396
Best arabidopsis TAIR name:	AT3G17040.1
Best arabidopsis TAIR symbol:	HCF107
Best arabidopsis TAIR defline:	high chlorophyll fluorescent 107
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Photosynthesis, screen 1 of 5 ( 88% confidence (FDR = 0.12))

Photosynthesis, screen 3 of 5 ( 99% confidence (FDR = 0.0014))

Photosynthesis, screen 4 of 5 ( 93% confidence (FDR = 0.062))

Photosynthesis, screen 5 of 5 ( 98% confidence (FDR = 0.02))

Photosynthesis or light sensitivity, screen 1 of 12 ( 96% confidence (FDR = 0.036))

Photosynthesis or light sensitivity, screen 2 of 12 ( 99% confidence (FDR = 0.0052))

Photosynthesis or light sensitivity, screen 3 of 12 ( 98% confidence (FDR = 0.011))

Photosynthesis or light sensitivity, screen 4 of 12 ( 99% confidence (FDR = 0.00033))

Photosynthesis or light sensitivity, screen 5 of 12 ( 99% confidence (FDR = 0.00017))

Photosynthesis or light sensitivity, screen 6 of 12 ( 99% confidence (FDR = 0.0047))

Photosynthesis or light sensitivity, screen 7 of 12 ( 93% confidence (FDR = 0.065))

Photosynthesis or light sensitivity, screen 8 of 12 ( 99% confidence (FDR = 0.0045))

Photosynthesis or light sensitivity, screen 9 of 12 ( 90% confidence (FDR = 0.095))

Photosynthesis or light sensitivity, screen 10 of 12 ( 99% confidence (FDR = 0.0031))

Photosynthesis or light sensitivity, screen 11 of 12 ( 99% confidence (FDR = 0.0032))

Photosynthesis or light sensitivity, screen 12 of 12 ( 95% confidence (FDR = 0.042))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.