Insertion junction: CLIP2.005898_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005898
Chromosome:chromosome 2
Location:7007275
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389615 MAC1 psaC mRNA stabilization factor; (1 of 1) PTHR23083//PTHR23083:SF403 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGGGAGTAACACAAAACCCCGGGGCAAACACTGCGCGAATGCAAGCAG
Internal bar code:AAGTCAGTATATTGTCCGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4916
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTGAGGCTTAGACTGAT
Suggested primer 2:TCGTACGGCTGCTCATGATC