Insertion junction: LMJ.RY0402.235130_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.235130
Chromosome:chromosome 9
Location:3490001
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g389615 MAC1 psaC mRNA stabilization factor; (1 of 1) PTHR23083//PTHR23083:SF403 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTAAGCTCAAGTGCCCAACTGCTTAATC
Internal bar code:GGCGGCACCCGCAAGTGCCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:601
LEAP-Seq percent confirming:99.4143
LEAP-Seq n confirming:679
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GAATGGCCAAGCAGGATAGA
Suggested primer 2:TGGGACAGTATACGGTGGGT