Insertion junction: CLIP2.002537_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002537
Chromosome:chromosome 12
Location:1428080
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488500 ARC6 Accumulation and replication of chloroplast; (1 of 2) PTHR33925//PTHR33925:SF3 - FAMILY NOT NAMED // PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTCCGCCGCAACGACGGCGCCGCCTCCGCCCTGGCACCCGCCGCCGT
Internal bar code:GAGTACTTAAAGGGGCTACAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2015
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCACGTAAATCCCAGGG
Suggested primer 2:CAACATGCTCAAGGCCATCG