Insertion junction: CLIP2.002554_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002554
Chromosome:chromosome 2
Location:4673184
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g107750 PCD1 Polyketide cyclase/dehydrase; (1 of 4) PF03364 - Polyketide cyclase / dehydrase and lipid transport (Polyketide_cyc) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACTCGCGAATGACTACTACAGGCCTTCCGCGGCGTCTGGCGCATGCA
Internal bar code:GTCCTGTTATTTCAAGGTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1484
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CACACTTGCAACCTCACAGC
Suggested primer 2:GTTGTGGGGTAGGAAAGGGG