Gene: Cre02.g107750
Overview
| Common name: | PCD1 |
| Defline: | Polyketide cyclase/dehydrase; (1 of 4) PF03364 - Polyketide cyclase / dehydrase and lipid transport (Polyketide_cyc) |
| Description: | |
| Synonyms: | g2209.t1,Cre02.g107750.t1.1,PCD1 |
| Chromosome: | chromosome 2 |
Protein Localization
A plasmid for expressing Cre02.g107750 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre02.g107750-Venus-3xFLAG
Imaged strain: CSI_LW05D4
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001157_1 | CLIP2.001157 | 3'UTR | 80 | 6.1 |
| CLIP2.001157_2 | CLIP2.001157 | 3'UTR | 80 | 6.1 |
| CLIP2.001345_1 | CLIP2.001345 | 3'UTR | 80 | 6.1 |
| CLIP2.001345_2 | CLIP2.001345 | 3'UTR | 80 | 6.1 |
| CLIP2.001420_1 | CLIP2.001420 | 3'UTR | 80 | 6.1 |
| CLIP2.001420_2 | CLIP2.001420 | 3'UTR | 80 | 6.1 |
| CLIP2.002554_1 | CLIP2.002554 | intron | 80 | 6.1 |
| CLIP2.002554_2 | CLIP2.002554 | intron | 80 | 6.1 |
| CLIP2.002984_1 | CLIP2.002984 | intron | 80 | 6.1 |
| CLIP2.002984_2 | CLIP2.002984 | intron | 80 | 6.1 |
| CLIP2.004019_1 | CLIP2.004019 | intron | 80 | 6.1 |
| CLIP2.004279_1 | CLIP2.004279 | CDS | 80 | 6.1 |
| LMJ.RY0402.216130_1 | LMJ.RY0402.216130 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.216130_2 | LMJ.RY0402.216130 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.236308_2 | LMJ.RY0402.236308 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF03364 |
| PANTHER: | PTHR34060 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT4G01650 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Polyketide cyclase / dehydrase and lipid transport protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.