Insertion junction: CLIP2.004019_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004019
Chromosome:chromosome 2
Location:4674095
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g107750 PCD1 Polyketide cyclase/dehydrase; (1 of 4) PF03364 - Polyketide cyclase / dehydrase and lipid transport (Polyketide_cyc) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCGCCCTCCATGCCCCCCTCCCTGCGCGCCTCTCGCCACCAGGTGGG
Internal bar code:AGGGCCTGTAAAAAGAAAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:931
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTTTCCTACCCCACAAC
Suggested primer 2:GCTCGCAAAAGCTAGGATGC