Insertion junction: CLIP2.002628_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002628
Chromosome:chromosome 3
Location:3397806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166650 CGLD3,HEL15 (1 of 1) PTHR24031:SF210 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 22; conserved protein with DEAD/DEAH box helicase domain and proline rich domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTCAATCAAGTCTGATCCCGACTACCAGGTGCGTTTAGAAGCGCTTGG
Internal bar code:TTCTGCTTCTAGTGCGAGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:825
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCCCACATGTGTTACCC
Suggested primer 2:ACCTCTAATCCCGACACCGA