Gene: Cre03.g166650
Overview
| Common name: | CGLD3,HEL15 |
| Defline: | (1 of 1) PTHR24031:SF210 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 22; conserved protein with DEAD/DEAH box helicase domain and proline rich domain |
| Description: | Conserved in the Green Lineage and Diatoms |
| Synonyms: | HEL15,g3420.t1 |
| Chromosome: | chromosome 3 |
Protein Localization
A plasmid for expressing Cre03.g166650 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre03.g166650-Venus-3xFLAG
Imaged strain: CSI_LW08A12
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
nucleus/nuclear envelope
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002628_1 | CLIP2.002628 | CDS | 80 | 6.1 |
| CLIP2.002628_2 | CLIP2.002628 | CDS | 80 | 6.1 |
| CLIP2.003395_1 | CLIP2.003395 | intron | 80 | 6.1 |
| CLIP2.003395_2 | CLIP2.003395 | intron | 80 | 6.1 |
| CLIP2.004754_1 | CLIP2.004754 | intron | 80 | 6.1 |
| CLIP2.004754_2 | CLIP2.004754 | intron | 80 | 6.1 |
| CLIP2.005644_1 | CLIP2.005644 | intron | 80 | 6.1 |
| CLIP2.005644_2 | CLIP2.005644 | intron | 80 | 6.1 |
| CLIP2.006098_1 | CLIP2.006098 | intron | 80 | 6.1 |
| CLIP2.006098_2 | CLIP2.006098 | intron | 80 | 6.1 |
| LMJ.RY0402.169912_1 | LMJ.RY0402.169912 | intron | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00270, PF00271 |
| PANTHER: | PTHR24031 PTHR24031:SF210 |
| KEGG_ec: | EC:3.6.4.13 |
| KEGG_orthology: | |
| KOG: | KOG0330 |
| Gene ontology terms:: | GO:0003676, GO:0005524 |
| Best arabidopsis TAIR name: | AT1G59990 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | DEA(D/H)-box RNA helicase family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.