Insertion junction: CLIP2.005644_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005644
Chromosome:chromosome 3
Location:3397133
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166650 CGLD3,HEL15 (1 of 1) PTHR24031:SF210 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 22; conserved protein with DEAD/DEAH box helicase domain and proline rich domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTCGTAGGTAAACCTCTACGGTCGGACCTCGTGACACTTCACGGTCG
Internal bar code:CAAACGCCATGTTTTCTACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1956
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCGTCTTCTTCAGCTTCT
Suggested primer 2:CCGTGGTCATGTGTCCTTGA