Insertion junction: CLIP2.006098_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006098
Chromosome:chromosome 3
Location:3397035
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166650 CGLD3,HEL15 (1 of 1) PTHR24031:SF210 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 22; conserved protein with DEAD/DEAH box helicase domain and proline rich domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAAGGCCACCTGAAATACCGGTACTCCCGAGACTCTTCATTGCGAGA
Internal bar code:GTCGGACATCAGTTACTTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1335
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGGGAGCTCGTGATTCG
Suggested primer 2:CCGTGGTCATGTGTCCTTGA