Insertion junction: CLIP2.002681_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002681
Chromosome:chromosome 10
Location:2259668
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g433950 (1 of 2) PTHR33222:SF3 - PROTEIN CURVATURE THYLAKOID 1C, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGTGAAGTGTCGAAGGTGCAAGCCATCAATCACAAAATCAAGAGGCAC
Internal bar code:AAATTTTATGTGGCGGGGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2196
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GACTCACGCAGGAACAGTGA
Suggested primer 2:CGCACAGGTGTGGAAAACAG