Insertion junction: CLIP2.002722_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002722
Chromosome:chromosome 2
Location:6803572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388097 TOC80,OEP80 Putative outer membrane chloroplast protein; (1 of 2) K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCGTGGTACATACTCAGTGCATGCAAGTGTGCGACACATGTTGAAGC
Internal bar code:TTTAAGTTCTAAGTGTATAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:907
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGAGTAGCGTACACTCGA
Suggested primer 2:AACCTGTTTGGGCTCAACCA