Insertion junction: CLIP2.002739_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002739
Chromosome:chromosome 10
Location:1038914
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425050 ROC59,ROC28 (1 of 1) K11807 - WD and tetratricopeptide repeats protein 1 (WDTC1); Rhythm Of Chloroplast 59 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACGGCCCCTCCTTCATGCGCTCCTGGTTGCGCCCCACCACCCCGTCC
Internal bar code:GGTTTCAGGGTTAACTGTAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:5330
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGAGGTGGGCTTCATCGG
Suggested primer 2:ATCAACAGCCTCCAGTGGTG