Insertion junction: CLIP2.002772_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002772
Chromosome:chromosome 3
Location:4761759
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177700 NIT2 Transcription factor regulating nitrogen metabolism; (1 of 1) IPR001932//IPR003035 - PPM-type phosphatase domain // RWP-RK domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCAGACCATTGGTAGGTCCAGGGCGGAATCGGCGCGTGCAGGGCCGTG
Internal bar code:GAGGGGGTCCATTTATAGACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2175
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCACATGTTCATGACTGCCC
Suggested primer 2:CTTGTGAACAACCACTGCCG