Insertion junction: CLIP2.002808_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002808
Chromosome:chromosome 12
Location:7726156
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554800 PRK1 (1 of 1) 2.7.1.19 - Phosphoribulokinase / Phosphopentokinase; Phosphoribulokinase, chloroplastic intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCTGCTTGCACGCGCTGCAACTCACCGGAGTCAGCGGCCAGACCGAT
Internal bar code:TTCTCATTATTTATGTTTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4826
LEAP-Seq percent confirming:97.3333
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGGCTTTCACTATGCGC
Suggested primer 2:CACGTGGTTGTAGATGGGCT