Gene: Cre12.g554800
Overview
| Common name: | PRK1 |
| Defline: | (1 of 1) 2.7.1.19 - Phosphoribulokinase / Phosphopentokinase; Phosphoribulokinase, chloroplastic |
| Description: | Calvin-Benson-Bassham cycle enzyme |
| Synonyms: | Cre12.g554800.t1.1,g13438.t1 |
| Chromosome: | chromosome 12 |
Protein Localization
The plasmid for this gene is not available.
Imaged strain: CSI_FC2A11
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.
Classification(s):
chloroplast/not homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.
 |
| Venus Venus+Chlorophyll |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002082_2 | CLIP2.002082 | intron | 80 | 6.1 |
| CLIP2.002808_1 | CLIP2.002808 | intron | 80 | 6.1 |
| CLIP2.002808_2 | CLIP2.002808 | intron | 80 | 6.1 |
| CLIP2.004047_1 | CLIP2.004047 | 3'UTR | 80 | 6.1 |
| CLIP2.004047_2 | CLIP2.004047 | 3'UTR | 80 | 6.1 |
| CLIP2.005292_1 | CLIP2.005292 | 3'UTR | 80 | 6.1 |
| CLIP2.005324_1 | CLIP2.005324 | intron | 80 | 6.1 |
| CLIP2.007083_1 | CLIP2.007083 | 3'UTR | 80 | 6.1 |
| CLIP2.007083_2 | CLIP2.007083 | 3'UTR | 80 | 6.1 |
| CLIP2.007273_3 | CLIP2.007273 | CDS | 80 | 6.1 |
| CLIP2.007442_1 | CLIP2.007442 | CDS | 80 | 6.1 |
| CLIP2.007442_2 | CLIP2.007442 | CDS | 80 | 6.1 |
| LMJ.RY0402.066813_1 | LMJ.RY0402.066813 | intron | 58 | 5.5 |
| LMJ.RY0402.113805_1 | LMJ.RY0402.113805 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.113805_2 | LMJ.RY0402.113805 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.119555_1 | LMJ.RY0402.119555 | CDS | 95 | 5.5 |
| LMJ.RY0402.119555_2 | LMJ.RY0402.119555 | CDS | 95 | 5.5 |
| LMJ.RY0402.194206_2 | LMJ.RY0402.194206 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.197323_1 | LMJ.RY0402.197323 | 5'UTR | 95 | 5.5 |
| LMJ.RY0402.197323_2 | LMJ.RY0402.197323 | 5'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF00485 |
| PANTHER: | PTHR10285 PTHR10285:SF52 |
| KEGG_ec: | EC:2.7.1.19 |
| KEGG_orthology: | K00855 |
| KOG: | KOG4203 |
| Gene ontology terms:: | GO:0005524, GO:0005975, GO:0008152, GO:0008974, GO:0016301 |
| Best arabidopsis TAIR name: | AT1G32060 |
| Best arabidopsis TAIR symbol: | PRK |
| Best arabidopsis TAIR defline: | phosphoribulokinase |
| Phytozome Locus Page |
Phenotypes
Mutants in this gene exhibit a phenotype under the following conditions:
| Photosynthesis or light sensitivity, screen 4 of 12 ( 85% confidence (FDR = 0.15)) |
| Photosynthesis or light sensitivity, screen 5 of 12 ( 90% confidence (FDR = 0.093)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.