Insertion junction: CLIP2.007442_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007442
Chromosome:chromosome 12
Location:7724344
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554800 PRK1 (1 of 1) 2.7.1.19 - Phosphoribulokinase / Phosphopentokinase; Phosphoribulokinase, chloroplastic CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCGCTGGTGTTGGACAGGTGGCTCTCCACGTAGATGAGCTCCTCCAG
Internal bar code:GTAGGAGGTAAGTTTCCTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1766
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAACATCCTAACCCGCT
Suggested primer 2:CGGGCTAGTTGAAACCACCT