Insertion junction: CLIP2.002811_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002811
Chromosome:chromosome 16
Location:6460276
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674950 POD2 Putative all-trans-retinol 13%252C14-reductase; (1 of 3) 5.2.1.13 - Prolycopene isomerase / CRTISO CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAAGGGACTGGACCGGCGCAGGTGGGGTGCAGAGGAGGATGTGGGCG
Internal bar code:AGCTTGCTATTTTTAGCGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4190
LEAP-Seq percent confirming:99.2647
LEAP-Seq n confirming:135
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:136

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGCTCCAAACACATCGC
Suggested primer 2:TGATGCCTTGCAACGTGTTG