Gene: Cre16.g674950
Overview
| Common name: | POD2 |
| Defline: | Putative all-trans-retinol 13%252C14-reductase; (1 of 3) 5.2.1.13 - Prolycopene isomerase / CRTISO |
| Description: | Phytoene dehydrogenase |
| Synonyms: | Cre16.g674950.t1.1,POD2,g16619.t1 |
| Chromosome: | chromosome 16 |
Protein Localization
A plasmid for expressing Cre16.g674950 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre16.g674950-Venus-3xFLAG
Imaged strain: CSI_LW08C9
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
shapes in cytoplasm/uncategorized shapes in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002811_1 | CLIP2.002811 | CDS | 80 | 6.1 |
| CLIP2.002811_2 | CLIP2.002811 | CDS | 80 | 6.1 |
| CLIP2.003745_1 | CLIP2.003745 | CDS | 80 | 6.1 |
| CLIP2.003745_2 | CLIP2.003745 | CDS | 80 | 6.1 |
| CLIP2.005016_3 | CLIP2.005016 | CDS | 80 | 6.1 |
| CLIP2.005051_1 | CLIP2.005051 | intron | 80 | 6.1 |
| CLIP2.007110_1 | CLIP2.007110 | intron | 80 | 6.1 |
| CLIP2.007110_2 | CLIP2.007110 | intron | 80 | 6.1 |
| CLIP2.007773_1 | CLIP2.007773 | CDS | 80 | 6.1 |
| CLIP2.007773_2 | CLIP2.007773 | CDS | 80 | 6.1 |
| LMJ.RY0402.057954_1 | LMJ.RY0402.057954 | CDS | 95 | 5.5 |
| LMJ.RY0402.057954_2 | LMJ.RY0402.057954 | CDS | 95 | 5.5 |
| LMJ.RY0402.085559_2 | LMJ.RY0402.085559 | intron | 58 | 5.5 |
| LMJ.RY0402.093461_3 | LMJ.RY0402.093461 | CDS | 73 | 5.5 |
| LMJ.RY0402.093461_4 | LMJ.RY0402.093461 | intron | 73 | 5.5 |
| LMJ.RY0402.099434_1 | LMJ.RY0402.099434 | intron | 73 | 5.5 |
| LMJ.RY0402.125171_1 | LMJ.RY0402.125171 | intron | 73 | 5.5 |
| LMJ.RY0402.201951_1 | LMJ.RY0402.201951 | intron | 73 | 5.5 |
| LMJ.RY0402.219692_1 | LMJ.RY0402.219692 | intron | 58 | 5.5 |
| LMJ.RY0402.222889_1 | LMJ.RY0402.222889 | intron | 58 | 5.5 |
Gene Annotations
| PFAM: | PF01593 |
| PANTHER: | PTHR10668 PTHR10668:SF67 |
| KEGG_ec: | EC:5.2.1.13 |
| KEGG_orthology: | |
| KOG: | KOG4254 |
| Gene ontology terms:: | GO:0016491, GO:0055114 |
| Best arabidopsis TAIR name: | AT1G57770 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | FAD/NAD(P)-binding oxidoreductase family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.