Insertion junction: CLIP2.007773_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.007773
Chromosome:chromosome 16
Location:6459676
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674950 POD2 Putative all-trans-retinol 13%252C14-reductase; (1 of 3) 5.2.1.13 - Prolycopene isomerase / CRTISO CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATCCCGGCCTGGAGCTGCACCACATCGTGGTCAACCGGTGGGAGGGT
Internal bar code:AGTCTACTTTCGAAGTAATAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1566
LEAP-Seq percent confirming:84.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGCTTCCGTGACAGGTG
Suggested primer 2:CATCTTGGCTGTAGGGGCAA