Insertion junction: CLIP2.007110_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.007110
Chromosome:chromosome 16
Location:6456521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674950 POD2 Putative all-trans-retinol 13%252C14-reductase; (1 of 3) 5.2.1.13 - Prolycopene isomerase / CRTISO intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATACATGGTACCATATCATACATGGCGCAGGCCACGGATAACCCACG
Internal bar code:ACTTGTACTGTGTTTAGCAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1385
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCTGCTTGACGTCTCAG
Suggested primer 2:CAACATTTGCACGACCAGCA