Insertion junction: LMJ.RY0402.057954_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.057954
Chromosome:chromosome 16
Location:6234868
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g674950 POD2 Putative all-trans-retinol 13%252C14-reductase; (1 of 3) 5.2.1.13 - Prolycopene isomerase / CRTISO CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGCAGGTGAGTGTGCCAGCCTGCCAGG
Internal bar code:GGGGGATATTACCTGCATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:980
LEAP-Seq percent confirming:99.1209
LEAP-Seq n confirming:3721
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGTATGGGATGCATTTTTGG
Suggested primer 2:CGTGATGTGATGTGGTGTGA