Insertion junction: LMJ.RY0402.125171_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.125171
Chromosome:chromosome 16
Location:6235989
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g674950 POD2 Putative all-trans-retinol 13%252C14-reductase; (1 of 3) 5.2.1.13 - Prolycopene isomerase / CRTISO intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAAAGGCCTCATGTATGTATGTAGTTAA
Internal bar code:ACTGGAGCACGCCGGCAAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:738
LEAP-Seq percent confirming:97.8089
LEAP-Seq n confirming:1607
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGACAGACGCATGCAAGG
Suggested primer 2:TGATGCTGAGCTTGAACCAC