Insertion junction: LMJ.RY0402.085559_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.085559
Chromosome:chromosome 16
Location:6234831
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g674950 POD2 Putative all-trans-retinol 13%252C14-reductase; (1 of 3) 5.2.1.13 - Prolycopene isomerase / CRTISO intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGGGCTAGGGCCTCTCGAAGCGGTGAGA
Internal bar code:ATGGATGGGGAAATGCAACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:141
LEAP-Seq percent confirming:79.4437
LEAP-Seq n confirming:1685
LEAP-Seq n nonconfirming:436
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGATGTGATGTGGTGTGA
Suggested primer 2:GGTATGGGATGCATTTTTGG