Insertion junction: CLIP2.002856_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002856
Chromosome:chromosome 16
Location:7015310
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673505 5'UTR
Cre16.g673617 PRF1,PRFA1 Putative chloroplast peptide chain release factor 1; (1 of 2) PTHR11075:SF9 - PEPTIDE CHAIN RELEASE FACTOR 1, MITOCHONDRIAL-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCATACCAAACACTGCATAAGTCACTGCTACACAGCTTCAGGTCCAAC
Internal bar code:AGGAGTGAAGCGCGATTACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:6234
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:144
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:144

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCAGTTGACTGGATGGTC
Suggested primer 2:AGGTGGCTGGGTTGATAACG