Insertion junction: CLIP2.002856_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002856
Chromosome:chromosome 16
Location:7015731
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673505 5'UTR
Cre16.g673617 PRF1,PRFA1 Putative chloroplast peptide chain release factor 1; (1 of 2) PTHR11075:SF9 - PEPTIDE CHAIN RELEASE FACTOR 1, MITOCHONDRIAL-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGCGCCGGACCCCGTCCTACCCCGTGATTCTCCGCAATCGCATCAAA
Internal bar code:GTCACCCGGAGCCACATGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1155
LEAP-Seq percent confirming:6.08696
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:108
LEAP-Seq n unique pos:115

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGGCTGGGTTGATAACG
Suggested primer 2:TGGCAGTTGACTGGATGGTC