Insertion junction: CLIP2.003013_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003013
Chromosome:chromosome 12
Location:3676791
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g513700 HEL52 DEAD box ATP-dependent RNA helicase; (1 of 1) K14808 - ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13] (DDX54, DBP10) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTATCAGGCACGTGAGCAGCTGATCATCACACCGCGCTCATGCCAGCC
Internal bar code:GTTGGGAGAACGGCATAGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2118
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCGGTTCGACAAGAAGAA
Suggested primer 2:ACAGCCTTCCGTTCGAATGT