Insertion junction: CLIP2.003059_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003059
Chromosome:chromosome 1
Location:6066065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g042800 DVR1 3%252C8-Divinyl protochlorophyllide a 8-vinyl reductase, chloroplast precursor; (1 of 1) K19073 - divinyl chlorophyllide a 8-vinyl-reductase (DVR) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTGCACCGAGCCTTGGCCAGTTGCTGACCACGTTGCAACGCAAGGGC
Internal bar code:GTCTGTCGCCGGGTGTGTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3074
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTTGCGAGCAAGATAGC
Suggested primer 2:CTTTGCGTTCCACAACCCTG