Gene: Cre01.g042800
Overview
| Common name: | DVR1 |
| Defline: | 3%252C8-Divinyl protochlorophyllide a 8-vinyl reductase, chloroplast precursor; (1 of 1) K19073 - divinyl chlorophyllide a 8-vinyl-reductase (DVR) |
| Description: | 3,8-divinyl protochlorophyllide a 8-vinyl reductase, chloroplast precursor; predicted chloroplast transit peptide 1-58; [PMID: 15695432; PMID: 15632054]. This is an NAD-dependent epimerase/dehydratase (see SNE family) however interacts with petF [PMID: 28938113] suggesting possibly uses petF not NAD. Also interacts with bestrophin-1 athylakoid membrane protein. |
| Synonyms: | Cre01.g042800.t1.1,g958.t1 |
| Chromosome: | chromosome 1 |
Protein Localization
A plasmid for expressing Cre01.g042800 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre01.g042800-Venus-3xFLAG
Imaged strain: CSI_LW08A3
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/not homogeneous/not pyrenoid depleted/enriched in thylakoid
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre14.g626700 | PETF,FDX1 | Cre01.g042800 | DVR1 | Mackinder et al. 2017 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.003004_1 | CLIP2.003004 | CDS | 80 | 6.1 |
| CLIP2.003059_1 | CLIP2.003059 | intron | 80 | 6.1 |
| CLIP2.005106_1 | CLIP2.005106 | 3'UTR | 80 | 6.1 |
| CLIP2.005990_1 | CLIP2.005990 | 3'UTR | 80 | 6.1 |
| CLIP2.006460_1 | CLIP2.006460 | 3'UTR | 63 | 6.1 |
| CLIP2.007579_1 | CLIP2.007579 | 5'UTR | 80 | 6.1 |
| CLIP2.007579_2 | CLIP2.007579 | 5'UTR | 80 | 6.1 |
| CLIP2.007618_1 | CLIP2.007618 | intron | 80 | 6.1 |
| LMJ.RY0402.193970_1 | LMJ.RY0402.193970 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.193970_2 | LMJ.RY0402.193970 | 3'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF05368 |
| PANTHER: | PTHR14194 PTHR14194:SF36 |
| KEGG_ec: | EC:1.3.1.75 |
| KEGG_orthology: | K19073 |
| KOG: | KOG1203 |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT5G18660 |
| Best arabidopsis TAIR symbol: | PCB2 |
| Best arabidopsis TAIR defline: | NAD(P)-binding Rossmann-fold superfamily protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.