Insertion junction: LMJ.RY0402.193970_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.193970
Chromosome:chromosome 1
Location:6037553
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g042800 DVR1 3%252C8-Divinyl protochlorophyllide a 8-vinyl reductase, chloroplast precursor; (1 of 1) K19073 - divinyl chlorophyllide a 8-vinyl-reductase (DVR) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGATTGAACTCGCGGCCCACGCCGCCAT
Internal bar code:CCGCCTGATTTTTTATCATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:680
LEAP-Seq percent confirming:99.3571
LEAP-Seq n confirming:1391
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAGGGGATTACGCGTGTG
Suggested primer 2:GGGTTGGTGGCTGAAGATAA