Insertion junction: CLIP2.006460_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006460
Chromosome:chromosome 1
Location:6062698
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g042800 DVR1 3%252C8-Divinyl protochlorophyllide a 8-vinyl reductase, chloroplast precursor; (1 of 1) K19073 - divinyl chlorophyllide a 8-vinyl-reductase (DVR) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTTCCGAACTGGAGTGCCACCCCCCAAGAACCGTCCGTATCCGAGCGG
Internal bar code:ATCGAGCACTTGACCTGTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:483
LEAP-Seq percent confirming:14.7059
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAAGTAGGGGATTACGCG
Suggested primer 2:CACGAAGCAACGAAAACGGT