Insertion junction: CLIP2.003074_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003074
Chromosome:chromosome 13
Location:2346350
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579050 APC1 (1 of 4) IPR002020 - Citrate synthase; Chlamydomonas specific family protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCTGGAAGCTGATGGCGCAGGTGAGTTGCGTTGAGGTCGTAGCCGTGG
Internal bar code:CTGCAGGGACATGACTGTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4438
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAATACGTCCTGGCGCTT
Suggested primer 2:ACTGAAGTTACTGCTGCGCT