Gene: Cre13.g579050
Overview
| Common name: | APC1 |
| Defline: | (1 of 4) IPR002020 - Citrate synthase; Chlamydomonas specific family protein |
| Description: | has many homologs but only in C. reinhardtii |
| Synonyms: | APC1,Cre13.g579050.t1.1,g14225.t1 |
| Chromosome: | chromosome 13 |
Protein Localization
A plasmid for expressing Cre13.g579050 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre13.g579050-Venus-3xFLAG
Imaged strain: CSI_LW03F7
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
shapes in cytoplasm/uncategorized shapes in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001668_1 | CLIP2.001668 | intron | 80 | 6.1 |
| CLIP2.003074_1 | CLIP2.003074 | CDS | 80 | 6.1 |
| CLIP2.003074_2 | CLIP2.003074 | CDS | 80 | 6.1 |
| CLIP2.003988_1 | CLIP2.003988 | 5'UTR | 80 | 6.1 |
| CLIP2.003988_2 | CLIP2.003988 | 5'UTR | 80 | 6.1 |
| CLIP2.004097_1 | CLIP2.004097 | 5'UTR | 80 | 6.1 |
| CLIP2.004097_2 | CLIP2.004097 | 5'UTR | 80 | 6.1 |
| CLIP2.004710_3 | CLIP2.004710 | intron | 80 | 6.1 |
| CLIP2.004710_4 | CLIP2.004710 | intron | 80 | 6.1 |
| CLIP2.006164_1 | CLIP2.006164 | intron | 80 | 6.1 |
| CLIP2.006429_1 | CLIP2.006429 | CDS | 80 | 6.1 |
| CLIP2.006429_2 | CLIP2.006429 | CDS | 80 | 6.1 |
| LMJ.RY0402.098569_1 | LMJ.RY0402.098569 | CDS | 73 | 5.5 |
| LMJ.RY0402.116303_1 | LMJ.RY0402.116303 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.119339_1 | LMJ.RY0402.119339 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.228285_1 | LMJ.RY0402.228285 | CDS | 73 | 5.5 |
Gene Annotations
| PFAM: | |
| PANTHER: | |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.