Insertion junction: CLIP2.004710_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004710
Chromosome:chromosome 13
Location:2345903
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579050 APC1 (1 of 4) IPR002020 - Citrate synthase; Chlamydomonas specific family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGTCAGCAGGAAAGCCCACCCTTGGGCCCACGCCACCACACCCGCTG
Internal bar code:AATCTTGTTCACCTATAGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1654
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACCGTGTTCAAGCTTTT
Suggested primer 2:CAACACAACACGTAAGCCCG