Insertion junction: CLIP2.003988_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003988
Chromosome:chromosome 13
Location:2346826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579050 APC1 (1 of 4) IPR002020 - Citrate synthase; Chlamydomonas specific family protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGTGAATCATTCCTCCGGACAGACCTCGCTACCTCTGTCGTGCACTAT
Internal bar code:GGTTGGACGGACTGCTTCCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3732
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAGCTTGAACACGGTCGC
Suggested primer 2:GAGCGCGCTATGAAATGCAA