Insertion junction: LMJ.RY0402.119339_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.119339
Chromosome:chromosome 13
Location:2300669
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g579050 APC1 (1 of 4) IPR002020 - Citrate synthase; Chlamydomonas specific family protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACGTGTCCCCACCAACACGCCTGAGCTA
Internal bar code:TTGTCGCACAGCTTGGCGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:901
LEAP-Seq percent confirming:99.7118
LEAP-Seq n confirming:5190
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTACGTGCTGCATTAGG
Suggested primer 2:CACGTGTCTACTTTCCGGGT