Insertion junction: CLIP2.004710_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004710
Chromosome:chromosome 13
Location:2345895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579050 APC1 (1 of 4) IPR002020 - Citrate synthase; Chlamydomonas specific family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGACACTGCCGCCGCAGAGTACGTGGCCAACCAGTGGAGGCAGGAGCA
Internal bar code:AATCTTGTTCACCTATAGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2322
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CAACACAACACGTAAGCCCG
Suggested primer 2:GCGACCGTGTTCAAGCTTTT